FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005091642

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005091642
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13488708
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACACTAT39200.012.6679828
AACACTA42000.011.8234517
CACTATA46500.011.1436029
AAACACT65900.07.64464046
CCACTCA35550.06.68067659
GCCCTTA49950.06.6277614
ACCAAAC91850.06.51510863
CAAACAC87600.06.40818365
CCAAACA94150.06.11524874
TAGCCCT57150.05.80352352
CACCCTA21000.05.34647875-79
Produced by FastQC (version 0.11.5)