FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005091649

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005091649
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18202785
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACACTA61000.013.5724697
CACTATA67600.012.3538459
ACACTAT67400.012.0700598
CAAACAC103050.08.3136365
AAACACT104200.08.2218836
ACCAAAC110700.07.8046013
GCCCTTA79200.07.7269984
CCAAACA122700.07.09999284
TAGCCCT92350.06.78279972
CACCCTA36700.05.41467675-79
CCCTTAT123100.05.32200675
TACCAAA177550.05.2716832
TATTTAG130650.05.23485959
Produced by FastQC (version 0.11.5)