FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005091774

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005091774
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14297110
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA128800.07.0183941
GAGCACA126700.06.81824069
AGAGCAC134500.06.6371838
CTAAGAG14350.00311037486.0474591
TCGGAAG155500.06.01988943
GGCTAAT24601.2329394E-55.56232452
ATCGGAA180400.05.38933322
Produced by FastQC (version 0.11.5)