FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005091778

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005091778
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13090793
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCACA117050.09.4713669
AGAGCAC127000.08.5027778
GATCGGA140750.08.0689991
TCGGAAG159550.07.1306883
ATCGGAA166800.06.95134832
TACACTA25201.4752004E-96.85620838
AAGAGCA189050.06.24511537
CTACACT34251.7290586E-75.2547587
Produced by FastQC (version 0.11.5)