FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005091810

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005091810
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14810179
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCTAGTC8200.08.4295275-79
CTAGTCC8300.08.3279675-79
GGCTAGT10250.06.743615675-79
GAGCTAG10851.8189894E-125.178447750-54
AGCTAGA14600.05.13115650-54
Produced by FastQC (version 0.11.5)