FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005091832

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005091832
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15334554
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCACTCA57150.07.3060789
GCCACTC74600.06.1760918
CACACGT166000.05.90818140-144
CACGTCT158900.05.7915077140-144
GATCGGA332150.05.7841067140-144
ACACGTC166800.05.750332140-144
AGATCGG356900.05.5726514140-144
AGCCACT87700.05.4998117
AGAGCAC220350.05.392071140-144
TAGATCG97750.05.3334293140-144
CTAGATC24950.05.3104577140-144
AGCACAC197550.05.2926636140-144
GAGCACA208900.05.2532883140-144
GCACACG200800.05.020524140-144
Produced by FastQC (version 0.11.5)