FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005091858

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005091858
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15523459
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACTA29950.021.3889248
ACACTAC48800.013.5694999
CCTAGAC11150.011.36463120-124
CCACACT68250.010.0195027
ACCACAC79200.09.2704356
CTAGACC14750.08.981385120-124
AACCACA103700.07.28855285
GGCTAGT9600.06.750188475-79
ATCCTAG21750.06.620495115-119
CTAGTCC10150.06.52629175-79
ATACAAC120800.06.45110131
TACAACC119950.06.2428282
CAACCAC123900.05.7517724
ACAACCA141900.05.4792673
CTAACAC27350.05.47494225-29
TCCTAGA27750.05.396598115-119
TACGTTA47051.8189894E-115.35537053
CCCCTAA30650.05.121068125-129
AGCTAGA14550.05.049265450-54
Produced by FastQC (version 0.11.5)