FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005091868

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005091868
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16366603
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCTAGTC10500.08.09153475-79
CTAGTCC9900.08.00010475-79
CCTAGAC7850.07.337312120-124
GGCTAGT11200.07.07152175-79
AGGCTAG11200.06.04293675-79
CTAGACC11550.05.8595266120-124
Produced by FastQC (version 0.11.5)