FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005091888

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005091888
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14306577
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCTAGTC8250.012.21878675-79
GGCTAGT8200.011.59081775-79
CTAGTCC8800.010.80053375-79
GAGCTAG8650.08.99338550-54
AGCTAGA10850.08.4975950-54
AGGCTAG10950.07.49626175-79
GCTAGAA14500.06.656597650-54
CTAGAAA18550.05.591574750-54
TCTTGTG94250.05.2821741