FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005091890

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005091890
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15376406
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAAGAG23600.014.3381398
CCCTAAG26250.012.8906696
CCTAAGA33200.010.4090267
TACCCTA32550.010.1747474
ACCCTAA37550.09.2033955
GTACCCT57700.07.12632233
TAAGAGC52350.06.7388589
GTGTACC76250.05.10883331
TGTACCC74900.05.10458472
Produced by FastQC (version 0.11.5)