FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005091904

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005091904
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14239458
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAATTCA88850.020.0951335
AATTCAC85150.019.0236116
GTCAATT73200.017.7136553
CGGCTAA40900.016.616331
GGCTAAT42700.015.857942
ATAATTC127150.015.7974134
AATTCAG104800.015.1818986
TCAATTC123900.014.991554
TACAATT91850.014.9011993
TTAGATC28750.014.5233558
CAATTCA96700.014.369035
GCTAATT46250.014.3292313
CTAATTC44100.014.2029584
GTAATTC76250.014.1628134
GAATTCA130500.013.6264595
CACAAAT91750.013.5827222
GGTAATT78500.013.5812233
ACAATTC94750.013.0691514
GAGTCAA50250.012.9490221
ACACAAA99750.012.8289431
Produced by FastQC (version 0.11.5)