FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005091910

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005091910
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16121162
Sequences flagged as poor quality0
Sequence length150
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGCTAGT10800.015.99669975-79
CTAGTCC11300.015.41628875-79
GCTAGTC11800.015.12908375-79
GAGCTAG11450.014.33712250-54
AGCTAGA12950.013.45482950-54
AGGCTAG12700.012.92331875-79
GCTAGAA15300.011.57647350-54
CTAGAAA17450.09.98510450-54
TCTTGTG101050.09.4871451
CTTGTGG144450.06.6783342
AAAGGAC154050.06.401689
TTAGAGC32050.06.24447345-49
CTAGATC6101.3922545E-85.901659140-144
TTGTGGA168950.05.83768373
TGTGGAA174950.05.76069364
CAAGTTA33700.05.682696360-64
TTTAGAG38500.05.123524745-49
TGGAAAG208600.05.107376
Produced by FastQC (version 0.11.5)