FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005091946

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005091946
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17701721
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGCTA44450.017.9789097
TAACTAG6103.9963413E-410.6217329
GGGGTCT84900.010.6026062
TCGCTAT86350.09.67178258
GGGTCTC94800.08.35592653
GTCTCGC119650.07.16065075
CGCTATG149250.06.1741669
TCTCGCT164600.05.64258536
CGGGGTC176650.05.27461671
GGTCTCG178350.05.00572354
Produced by FastQC (version 0.11.5)