FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005091947

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005091947
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17701721
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTGTAG69150.08.5390427
TAGTCCC60550.06.1835099
CTGTAGT105000.05.55491078
CTAAGTT56900.05.3136983100-104
TGTAGTC125000.05.12655749
AGACTAG10705.456968E-125.113198870-74
ACTAAGT49850.05.0543203100-104
CGTGCCT116150.05.02128933
Produced by FastQC (version 0.11.5)