FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092017

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092017
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13912384
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCTAACG25150.015.1125381
CTAACGG27000.013.6135772
CCTGTAG45550.07.5859427
GTGATTC74700.06.36358264
CTCGAAT68300.06.118393
AGATCCA81150.06.03929472
CCTAGTC7953.6379788E-125.976813330-34
GATCCAT71650.05.8323253
CGTGATT87150.05.7044213
TAGTCCC39251.1823431E-105.68561129
GCCTAGT8801.4551915E-115.56312930-34
TAAGGAG87950.05.4850451
CTAGATC14700.05.387128140-144
AGTCTAG6902.0184052E-75.217128835-39
TCGAATC85050.05.16575574
CCCTAGG5951.0242482E-55.08188930-34
Produced by FastQC (version 0.11.5)