FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092055

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092055
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14265735
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTAGTCC21806.184564E-117.92544365
ATTAGTC27200.07.676884
CTAGGGG6350.07.255507535-39
CCCTAGG6300.07.08455735-39
CCTAGGG6151.8189894E-127.02324335-39
TAGTCCC32600.06.8456236
TGATTAG28703.5852281E-96.2756092
GATTAGT32301.9645086E-106.24181843
TCCCTAG8301.4551915E-115.72436635-39
Produced by FastQC (version 0.11.5)