FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092117

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092117
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13277111
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACTAGAC14150.020.349269
ACACTAG15200.018.4696877
CACTAGA17350.017.840798
GTACACT37050.08.9376745
TACACTA40650.07.4377856
GACCCAC60800.07.03610231
ACCCACC68800.06.281712
GGTACAC58250.05.56132174
TGTGCAA85550.05.55352838
CCCACCC83750.05.41523363
CCACCCT82050.05.1764844
Produced by FastQC (version 0.11.5)