FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092134

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092134
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13794562
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTTCAT157050.09.5834021
GGGGGGT14901.7529419E-78.21536352
CATTGAT182700.07.6072921
CATTACC118750.07.58032371
CCTTCAC135700.07.3764311
CCTTGAT171550.07.2621751
CATGGAT122200.06.8948691
CCTTGAC148150.06.805151
CCTCCAT128150.06.79951761
CCTGCAC200550.06.7865721
GGGGGGG22455.4564225E-86.7354572
AGGGGGG19902.401377E-66.5137461
TAGCGAC155000.06.475836140-144
GAATACC178300.06.38141631
AGTCACA241150.06.192788140-144
CATACAC88450.06.18766981
CATGCAT54000.06.1344471
CAACACC143550.06.12023351
CAGTCAC264900.06.110533140-144
CACACGT493200.06.047164140-144
Produced by FastQC (version 0.11.5)