FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092147

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092147
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15296191
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCCCTTA54750.08.2843574
ACACTAT58850.07.5837948
AACACTA54200.07.4375537
CACTATA63800.06.43123059
TAGCCCT67250.06.3164762
CCCTTAT91900.05.71804055
TATTTAG98450.05.04514039
Produced by FastQC (version 0.11.5)