FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092160

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092160
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14585660
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCTAACC24300.09.1837757
CTAACCA28950.08.454668
AGCTAAC25750.08.3870626
CCAGCTA40750.06.36006454
TAACCAC51750.05.4252549
CAGCTAA46102.9467628E-105.15322165
Produced by FastQC (version 0.11.5)