Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005092214 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 14700134 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AGAGCAC | 21290 | 0.0 | 8.823016 | 8 |
GAGCACA | 22990 | 0.0 | 8.233207 | 9 |
GGGGGGG | 4675 | 0.0 | 8.0071125 | 2 |
GATCGGA | 24570 | 0.0 | 7.855618 | 1 |
TCGGAAG | 28105 | 0.0 | 7.1717825 | 3 |
ATCGGAA | 32115 | 0.0 | 6.388386 | 2 |
AAGAGCA | 31945 | 0.0 | 6.195708 | 7 |
GAAGAGC | 33520 | 0.0 | 6.162308 | 6 |
GGAAGAG | 34280 | 0.0 | 6.088674 | 5 |
CTAGATC | 1800 | 0.0 | 5.5177097 | 140-144 |
CGGAAGA | 38245 | 0.0 | 5.401166 | 4 |