FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092215

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092215
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14700134
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA248750.07.0917271
AGAGCGT254450.06.9326518
GAGCGTC259650.06.73835139
TCGGAAG287800.06.22932963
AAGAGCG297050.06.1807817
ATCGGAA318600.05.89842842
GGAAGAG348900.05.4686195
GAAGAGC344100.05.46120646
TAGATCT64550.05.421046340-44
TAGATCG68700.05.2193947140-144
CGGAAGA377100.05.0787624
Produced by FastQC (version 0.11.5)