FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092234

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092234
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14052236
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCACTCA46350.011.9606349
TAGCATG32700.010.7885128
GCCACTC74700.07.90326458
CCCTTAA46000.07.512794
TGAGTAG36950.06.8203563
GTGAGTA39850.06.50472742
AGCCACT87000.06.3721317
AGTGAGT40451.8189894E-126.05293941
CTAGGAG9100.05.854751650-54
GGCCTAA23850.05.79610175-79
GAGTAGG45959.094947E-125.4840374
CCTTTAG69300.05.40241534
TCCCTTA73100.05.31899743
AAGCCAC107900.05.20464376
AGTAGGA55850.05.15649565
CTAGATC8556.166374E-95.052986140-144
Produced by FastQC (version 0.11.5)