FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092239

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092239
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17948046
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAAGAG21855.4023985E-107.5773778
CCCTAAG20103.9458064E-76.80448346
CCTAAGA26153.2850949E-96.60666137
ACCCTAA26303.7832346E-55.2004435
TACCCTA29458.516348E-65.1338774
Produced by FastQC (version 0.11.5)