Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005092362 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 17469618 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 54 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CCTTCAT | 23710 | 0.0 | 7.4306626 | 1 |
CCTTCAC | 24370 | 0.0 | 6.6939096 | 1 |
CCTGCAT | 23855 | 0.0 | 6.139384 | 1 |
CACACGT | 14875 | 0.0 | 5.846915 | 140-144 |
CCTACAT | 11180 | 0.0 | 5.771664 | 1 |
AGTCACA | 6720 | 0.0 | 5.485516 | 140-144 |
CCTTGAT | 23155 | 0.0 | 5.291694 | 1 |
CATTACC | 11265 | 0.0 | 5.2775884 | 1 |
CCTGCAC | 29525 | 0.0 | 5.1322665 | 1 |
CCTACAC | 9325 | 0.0 | 5.1315427 | 1 |
TACTAGT | 1840 | 0.008197883 | 5.1224575 | 1 |
CCTTGAC | 19615 | 0.0 | 5.0638995 | 1 |
CATGGAT | 12315 | 0.0 | 5.0631037 | 1 |
CATTCAT | 12925 | 0.0 | 5.0485287 | 1 |