FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092403

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092403
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18520486
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACACTA58500.013.7754127
CACTATA61650.013.7736069
GCCCTTA66750.012.0757344
ACACTAT70150.011.5902618
TAGCCCT79750.010.2921282
TATTTAG83200.09.9465689
AAACACT115050.07.6296586
ACCAAAC117300.07.609133
CCCTTAT112750.07.46763855
CAAACAC133250.06.31877145
CCAAACA139150.06.2581934
CCTTATT155100.06.030646
AGCCCTT151200.05.9031153
GTAGCCC141100.05.59813171
TACCAAA164750.05.46280342
Produced by FastQC (version 0.11.5)