FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092472

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092472
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18510649
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGAGCAC166850.017.686938
GAGCACA168850.017.520069
GATCGGA198300.015.211011
TCGGAAG281200.011.4978933
AAGAGCA281450.011.1757077
GAAGAGC308850.010.2308776
ATCGGAA323750.010.0109592
GGAAGAG353550.09.1410035
CGGAAGA450500.07.22174174
AGTCACG90350.06.773797525-29
CTCGTAT103200.05.915420540-44
CAGTCAC110400.05.713161525-29
TCTCGTA111250.05.68151240-44
CACGTCT123550.05.324738510-14
CACACGT122200.05.265760410-14
ACACGTC134100.05.066849710-14
Produced by FastQC (version 0.11.5)