FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092508

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092508
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16556138
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCTAAG22551.3096724E-107.66203366
TACCCTA30507.2759576E-126.84539464
ACCCTAA31751.8189894E-116.57557345
CTAAGAG22402.5424579E-66.10639578
Produced by FastQC (version 0.11.5)