FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092509

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092509
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16556138
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCTAAG23901.8120772E-76.32193476
CTAAGAG23106.568407E-76.22965058
ACCCTAA31456.85759E-106.1781855
TACCCTA29554.4612534E-85.8453564
ACTAATC30956.946648E-75.34682276
Produced by FastQC (version 0.11.5)