FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092556

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092556
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13831924
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCCCAT99600.08.7455517
CCCCATC97750.08.61648758
CCCATCC103650.08.4732829
ATCCCCA113400.07.80824046
CATCCCC113100.07.70165255
TCATCCC118750.07.3352424
CACTATA81000.06.0434529
ATCTCAT169100.05.89492561
AACACTA77600.05.38055947
CACACGT73250.05.3085093140-144
GATCGGA135950.05.286129140-144
AAACACT88950.05.26051866
ACACTAT84700.05.09951648
CTCATCC182100.05.0630713
ACCAAAC113750.05.0025293
CACGTCT74300.05.0008903140-144
Produced by FastQC (version 0.11.5)