FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092610

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092610
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16372949
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGGGGGG44050.08.9949152
CTAAGAG26600.07.8494744
TGGGGGG32050.07.7551241
AGGGGGG24757.1486284E-107.08881951
ACTAAGA48400.05.65606743
GGGGGGT18400.00123421715.5622191
CACGTCT170000.05.2597747140-144
CCACTAG10155.456968E-125.24830820-24
GGGGGGA40556.1372702E-95.22811371
CACACGT189350.05.1785274140-144
ACACGTC186250.05.001871140-144
Produced by FastQC (version 0.11.5)