FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092611

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092611
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16372949
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGGGGGT24353.680543E-86.5076752
GGGGGGG52950.06.39343172
AGGGGGG30305.396214E-85.79278471
CTAAGAG26601.3227691E-65.68347844
TGGGGGG36853.3560354E-95.55698631
GGGGGGA46301.0913936E-115.44489152
GTAGGGA147800.05.076378140-144
CTAGATC24600.05.0344734140-144
Produced by FastQC (version 0.11.5)