FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092635

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092635
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17088638
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGCATG44550.010.1789088
GTGAGTA43950.09.9970772
AGTGAGT46000.09.6969451
TAACCCC61050.07.309959
GTCTCTT81900.05.9821031
CTAGATC16500.05.411155140-144
CTAGGAG18750.05.299205350-54
ATAACCC92900.05.19119648
TGAGTAT108950.05.0889063
Produced by FastQC (version 0.11.5)