FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092693

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092693
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13246305
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCGTC226950.07.01129349
AGAGCGT228250.06.9710718
AAGAGCG257900.06.4208317
GATCGGA254850.06.1914751
TCGGAAG284200.05.70012863
ATCGGAA302100.05.38994362
GAAGAGC321000.05.315676
GTTACGT39001.0777512E-85.2936891
TAGATCG82550.05.2322826140-144
AGATCGG261500.05.2304482140-144
CGGAAGA342250.05.02784974
ACGTTAA25901.6424715E-45.00380754
Produced by FastQC (version 0.11.5)