FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092695

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092695
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15578154
Sequences flagged as poor quality0
Sequence length150
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA168450.06.39476731
TAGCGTG33500.06.14614135-39
TAGCGTA35600.06.02632530-34
TCGGAAG185700.05.89296533
AGAGCGT180800.05.85359248
ATCGGAA217300.05.30376342
AGTGTAG42200.05.254481325-29
Produced by FastQC (version 0.11.5)