Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005092698 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 15713415 |
Sequences flagged as poor quality | 0 |
Sequence length | 150 |
%GC | 53 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CCACTCA | 4875 | 0.0 | 13.144616 | 9 |
GCCACTC | 6635 | 0.0 | 9.440845 | 8 |
AGCCACT | 8270 | 0.0 | 8.183797 | 7 |
AAGCCAC | 9570 | 0.0 | 6.92163 | 6 |
GGCCTAA | 2005 | 0.0 | 6.3201995 | 75-79 |
CTCACTA | 2590 | 0.0 | 5.504247 | 15-19 |
TACAAAG | 13390 | 0.0 | 5.430918 | 2 |
CTAGATC | 975 | 4.9112714E-11 | 5.169231 | 140-144 |
CCCCTAA | 3025 | 0.0 | 5.0459504 | 110-114 |