FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092720

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092720
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14945443
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCACA119400.011.6346229
AGAGCAC132200.010.1814458
GGGGGGG58850.09.5486682
GATCGGA165300.08.6409411
TCGGAAG201500.07.1149643
AAGAGCA212600.06.70392047
ATCGGAA230100.06.35585642
GAAGAGC260400.05.47332336
GGAAGAG276350.05.41796975
Produced by FastQC (version 0.11.5)