FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092740

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092740
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32196491
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCGGGAT113500.017.6885551
TACACGA164800.017.6695611
CAATGGA141550.017.6168568
CTAATGG151400.017.5354061
ACTGATG100600.017.3913251
CCTTACG127350.017.296541
ATAGACC88150.017.294321
CTAGCCT152750.017.2036131
CTCGAAA116950.017.1924061
GGCTCGA92850.017.140721
GACTAAC86200.017.1401271
CCGTACT105250.017.117191
CGGACGT111450.017.0535341
CGACCTT129850.016.963531
TTAACTC176600.016.9420741
TGATTTC112700.016.9353921
ACTGAAC85950.016.8990211
AGGCCCT117150.016.8820748
TCGCCTG108600.016.8301588
GGGCATC100050.016.8070491
Produced by FastQC (version 0.11.5)