FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092748

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092748
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28739787
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATGAAA112850.017.80281
GATCGCG132500.017.7588981
CGTGCGA95600.017.636917
GATGCTA121050.017.5799161
CCGGGAT92050.017.5452141
TGCGTGG124000.017.5003991
TAAACCG103250.017.4241281
CCGGTAG78250.017.380591
CGGACAC105850.017.2701171
CTTAGGA134900.017.1834931
GTGGGAC98950.017.1304652
ACGAGCC103100.017.0808941
CGAGCAC73000.017.0688841
TCGGCGC112100.017.0563248
CCTCTGA103050.016.9339141
GACCAAT138250.016.9262451
CCTACCA122550.016.8996121
GAATGAA88350.016.8877661
GAATAAG136750.016.8852121
CGCTTCA117050.016.8649731
Produced by FastQC (version 0.11.5)