FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005092751

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092751
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73989771
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCTCTA1991271526.912794472630548No Hit
ACTGCTCG1908529125.79449935045751No Hit
TGGTAAAC1807651224.43109602271914No Hit
GAAAGGGT1569840521.216993630105975No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)