FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092752

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092752
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34353288
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGGACCT147050.018.1685051
TGCTACC163200.017.6883161
GACTAAC119950.017.611811
ATGCGAT109400.017.5364481
CCGGTAG149850.017.5353181
ACTGAAC117850.017.441851
CCTTCCC188650.017.3221841
ATGAATG110700.017.31519510
AAACCTG124550.017.2906231
GATCGCG122500.017.253361
GGAACTT153600.017.1853541
GCCGAAG111100.017.1333393
ATCGAGT121650.017.1025771
CACACCT180600.017.0807511
ATTGGTG139450.016.9853121
CGAGCAC122200.016.9355621
CAATGAA95950.016.9239928
ACTGATG80900.016.7409651
TGCCAAA115050.016.7361071
GGGAGAT107700.016.7173391
Produced by FastQC (version 0.11.5)