FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092754

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092754
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38970616
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGGGTGA253600.017.835731
ACTGATG130550.017.7025811
GGGACCT127950.017.5542771
CTGCCTA196350.017.4387911
TTGACTT163450.017.3147011
TGCTACC178300.017.252361
GACCTGG147150.017.132711
GACTAAC111000.017.0816141
ACGCCGA147000.017.0753611
CGATTGA143700.017.0708161
ATAGACC118050.017.0695691
CCGGTAG124850.017.0369741
GAATGAA121250.016.990221
AGACTAG107550.016.9315788
GATGCTA160950.016.838051
CTCGAAA112250.016.8290311
ATGCGAT99750.016.7724531
CCCTCCT179450.016.7628521
CTGCGGA121800.016.7082371
CCGGGAT91600.016.692661
Produced by FastQC (version 0.11.5)