FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092757

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092757
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37874870
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGGGTGA252650.017.9385281
GGGACCT122500.017.7841781
ACTGATG127650.017.5211661
TGCTACC173100.017.4337271
CTGCCTA181150.017.4320411
GAATGAA121650.017.3082031
ACGCCGA142400.017.2937851
GACTAAC105650.017.2595391
CGATTGA143750.017.2566241
ATAGACC114550.017.254561
TTGACTT158750.017.1193751
ATGCGAT97500.017.0095161
GATGCTA150050.016.9587231
CCGGTAG125350.016.9489271
GACCTGG141600.016.8616941
TGATTTC141950.016.777841
AGACTAG101800.016.7477848
CCCTCCT174850.016.732941
CGCCGAG78200.016.6868422
AGATTGC125550.016.6351151
Produced by FastQC (version 0.11.5)