FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092759

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092759
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30376175
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACTGATG133500.018.2006761
CTACCCA134700.017.5038361
GCGCGAT73100.017.502271
CCGGGAT89450.017.4455831
ACCCACT120000.017.4056591
TGATTTC139900.017.382351
ACGAGCC101250.017.348851
TGACTAG102900.017.0123351
AAACCTG102400.016.880491
TTGGGCC89850.016.84793710
CCTCTGA126300.016.8463341
CTCGAAA96700.016.7996711
TTGCCGT121600.016.7159611
AGTGAAC100800.016.7143848
TACGGGC111350.016.6915511
ATTGGTG117350.016.6649841
CGGACTG70550.016.660271
GGAACTT92800.016.6433431
ACTGAAC78150.016.6272871
GCCTCTA150100.016.554351
Produced by FastQC (version 0.11.5)