FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092765

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092765
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32329686
Sequences flagged as poor quality0
Sequence length8
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCGCAGC1202010637.17977959946781No Hit
CATCACTT822273925.434020608798985No Hit
ACAATTCA789428524.418068891853757No Hit
GTGTGGAG332827710.294801502247811No Hit
CATCCCTT879760.2721214180675927No Hit
TGCGCCGC780200.24132619166174393No Hit
CATCACTA507720.15704451939310515No Hit
ACAATTAA359290.11113315483484747No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)