FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092773

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092773
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31544981
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCAAGGCC847207926.85713774879116No Hit
CTCCTAGT754080323.904921673593655No Hit
GATGCCAA751002323.807346721812895No Hit
AGGTATTG707536822.429457161505344No Hit
GCTGCCAA474720.15048986715192506No Hit
TCACGGCC329670.10450790888097221No Hit
GATGCAAA320970.10174994240763689No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)