FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092778

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092778
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28921663
Sequences flagged as poor quality0
Sequence length8
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTATAGTG822379328.43471691098814No Hit
GCGAGAGT801207327.702670486133524No Hit
TACGTTCA678062423.444792922177403No Hit
AGTCCCAC551818919.07977767391868No Hit
AGTCCCCC396220.1369976546646021No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)