FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092781

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092781
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73989771
Sequences flagged as poor quality0
Sequence length26
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGCTGG316850.017.4499661
CGACCTT313550.017.394381
GAATGAA275050.017.261871
CTTAGGA269300.017.2293241
CAATGGA297800.017.1497368
GGGCATC243350.017.0362281
ACTTGAC225100.016.96172110
ACTGAAC198700.016.9533081
TCTATTG313350.016.6681521
CCGGGAT180000.016.6197381
TGAGCCG171700.016.6134361
GATCTAG262950.016.6107881
GACCTGG260550.016.6025681
GCGCGAT153200.016.5892281
GACTAAC174350.016.5846521
ATGCGAT163800.016.584261
CGAGAAG301700.016.5492951
CTCGAAA202650.016.5389541
CGGACAC225050.016.5193821
AAACCTG200200.016.4815671
Produced by FastQC (version 0.11.5)