FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005092791

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092791
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences62100212
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACCCTAC1683256527.105487176114636No Hit
TCTAGCGA1573692025.34116952773044No Hit
AGAGTGTG1428177622.997950473985497No Hit
CTGTAACT1416578022.81116206173338No Hit
GCCCCTAC2649210.4266024083782516No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)