FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005092792

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005092792
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63293546
Sequences flagged as poor quality0
Sequence length8
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACCCTAC1717184127.130477094773614No Hit
TCTAGCGA1602631325.320611678163836No Hit
AGAGTGTG1456481923.011538964810093No Hit
CTGTAACT1435191522.675163436095048No Hit
GCCCCTAC3030560.4788102723775343No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)